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  • About

    Circa

    Gallery

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    Tutorial

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    Structural variants & long-read sequencing in cancer
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    RNA-Seq differential expression with DESeq2
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    Genome alignments & homology with MUMmer4
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    Copy-number variations and translocations in cancer
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    Genome assembly and synteny in plants
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    Genome assembly and synteny in wasps
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    Plasmid features from bacterial genomes
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    Bacterial genome alignments
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    How to: Color by column

    Coloring tracks by structural variant type

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    How to: Copy number ideas

    Many ways to show copy number data in Circa

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    How to: Heatmap ideas

    Several track types with continuous color scales

    Documentation
    • Supported input files
    • Supported track types
    • Data Mapper: Connecting data to a track
    • Chromosome name matching
    • Customizing chromosome names
    • Flipping chromosomes and mirroring genomes
    • Install Circa as an app
    • Data privacy